Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AC099548.2-209ENST00000480264 625 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 AC079140.1-201ENST00000508039 487 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AL109936.8-201ENST00000641772 604 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AL512353.2-201ENST00000448759 1962 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AC104417.2-201ENST00000562989 1793 ntBASIC14.19□□□□□ -0.14
RIPPLY3P57055 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RIPPLY3P57055 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.19□□□□□ -0.14
RIPPLY3P57055 AC007541.1-201ENST00000570282 1469 ntBASIC14.18□□□□□ -0.14
RIPPLY3P57055 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.18□□□□□ -0.14
RIPPLY3P57055 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AC119751.2-201ENST00000504529 210 ntBASIC14.18□□□□□ -0.14
RIPPLY3P57055 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AC026150.2-201ENST00000564693 1156 ntBASIC14.18□□□□□ -0.14
RIPPLY3P57055 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 AL353593.2-201ENST00000602529 1483 ntBASIC14.18□□□□□ -0.14
RIPPLY3P57055 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.18□□□□□ -0.14
RIPPLY3P57055 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIPPLY3P57055 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 AC093503.3-201ENST00000624917 2352 ntBASIC14.17□□□□□ -0.14
RIPPLY3P57055 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms