Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ4P56696 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ4P56696 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ4P56696 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KCNQ4P56696 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.56■■□□□ 1.04
KCNQ4P56696 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.56■■□□□ 1.04
KCNQ4P56696 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
KCNQ4P56696 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ4P56696 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
KCNQ4P56696 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.55■■□□□ 1.04
KCNQ4P56696 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
KCNQ4P56696 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
KCNQ4P56696 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KCNQ4P56696 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
KCNQ4P56696 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
KCNQ4P56696 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 LINC00304-203ENST00000565008 1864 ntBASIC21.54■■□□□ 1.04
KCNQ4P56696 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.54■■□□□ 1.04
KCNQ4P56696 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.54■■□□□ 1.04
KCNQ4P56696 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 MIR658-201ENST00000385210 100 ntBASIC21.54■■□□□ 1.04
KCNQ4P56696 MTND6P24-201ENST00000440466 518 ntBASIC21.54■■□□□ 1.04
KCNQ4P56696 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNQ4P56696 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNQ4P56696 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNQ4P56696 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ4P56696 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 LINC00896-202ENST00000609602 2128 ntBASIC21.53■■□□□ 1.04
KCNQ4P56696 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 AL353779.1-201ENST00000434793 351 ntBASIC21.53■■□□□ 1.04
KCNQ4P56696 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNQ4P56696 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.53■■□□□ 1.04
KCNQ4P56696 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNQ4P56696 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ4P56696 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 AC012317.2-201ENST00000623305 2251 ntBASIC21.53■■□□□ 1.04
KCNQ4P56696 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KCNQ4P56696 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ4P56696 AC138028.4-201ENST00000564984 1845 ntBASIC21.52■■□□□ 1.04
KCNQ4P56696 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ4P56696 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ4P56696 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KCNQ4P56696 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNQ4P56696 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ4P56696 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNQ4P56696 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ4P56696 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ4P56696 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
KCNQ4P56696 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms