Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH4P55283 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.44■□□□□ 0.38
CDH4P55283 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH4P55283 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH4P55283 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 AC018845.2-201ENST00000568326 409 ntBASIC17.44■□□□□ 0.38
CDH4P55283 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 ACTL9-202ENST00000612068 1252 ntBASIC17.44■□□□□ 0.38
CDH4P55283 AC007064.4-201ENST00000637740 555 ntBASIC17.44■□□□□ 0.38
CDH4P55283 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDH4P55283 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH4P55283 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH4P55283 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDH4P55283 TOP3BP1-201ENST00000420768 1380 ntBASIC17.43■□□□□ 0.38
CDH4P55283 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH4P55283 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH4P55283 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH4P55283 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH4P55283 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH4P55283 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH4P55283 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH4P55283 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH4P55283 AC005412.3-201ENST00000580309 715 ntBASIC17.42■□□□□ 0.38
CDH4P55283 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CDH4P55283 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDH4P55283 AC023141.13-201ENST00000604991 943 ntBASIC17.42■□□□□ 0.38
CDH4P55283 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH4P55283 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH4P55283 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH4P55283 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH4P55283 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH4P55283 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH4P55283 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms