Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.83□□□□□ -0.04
HCFC1P51610 TUBB3P1-201ENST00000405796 1332 ntBASIC14.83□□□□□ -0.04
HCFC1P51610 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.83□□□□□ -0.04
HCFC1P51610 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 UXT-AS1-201ENST00000590504 1525 ntBASIC14.83□□□□□ -0.04
HCFC1P51610 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.83□□□□□ -0.04
HCFC1P51610 AL671277.1-201ENST00000429656 993 ntBASIC14.83□□□□□ -0.04
HCFC1P51610 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.83□□□□□ -0.04
HCFC1P51610 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.83□□□□□ -0.04
HCFC1P51610 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.83□□□□□ -0.04
HCFC1P51610 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HCFC1P51610 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.83□□□□□ -0.04
HCFC1P51610 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.83□□□□□ -0.04
HCFC1P51610 LINC01451-201ENST00000623792 534 ntBASIC14.83□□□□□ -0.04
HCFC1P51610 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.83□□□□□ -0.04
HCFC1P51610 GNAS-203ENST00000306120 1878 ntBASIC14.83□□□□□ -0.04
HCFC1P51610 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.83□□□□□ -0.04
HCFC1P51610 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HCFC1P51610 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HCFC1P51610 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HCFC1P51610 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 RBPMS2P1-201ENST00000437762 623 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.82□□□□□ -0.04
HCFC1P51610 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.82□□□□□ -0.04
HCFC1P51610 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.82□□□□□ -0.04
HCFC1P51610 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.82□□□□□ -0.04
HCFC1P51610 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 AF228730.6-201ENST00000641497 218 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 AC084121.3-201ENST00000641716 218 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 AC105233.6-201ENST00000642093 218 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HCFC1P51610 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HCFC1P51610 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 LYSMD4-203ENST00000378904 2122 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HCFC1P51610 TREML5P-201ENST00000421694 576 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 SPDYE14P-201ENST00000442619 822 ntBASIC14.82□□□□□ -0.04
HCFC1P51610 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.82□□□□□ -0.04
HCFC1P51610 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.82□□□□□ -0.04
HCFC1P51610 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.82□□□□□ -0.04
HCFC1P51610 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.81□□□□□ -0.04
HCFC1P51610 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
HCFC1P51610 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.81□□□□□ -0.04
HCFC1P51610 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.81□□□□□ -0.04
HCFC1P51610 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.81□□□□□ -0.04
HCFC1P51610 SPDYE7P-202ENST00000420373 878 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 AC097493.3-201ENST00000509725 367 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms