Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.06□□□□□ -0.16
NKX2-1P43699 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.06□□□□□ -0.16
NKX2-1P43699 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 AL512604.3-201ENST00000569583 964 ntBASIC14.06□□□□□ -0.16
NKX2-1P43699 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NKX2-1P43699 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 AC105917.1-201ENST00000506637 2539 ntBASIC14.06□□□□□ -0.16
NKX2-1P43699 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-1P43699 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-1P43699 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-1P43699 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-1P43699 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-1P43699 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-1P43699 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 AC103702.1-201ENST00000548801 2630 ntBASIC14.05□□□□□ -0.16
NKX2-1P43699 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 AC092364.2-201ENST00000596710 2692 ntBASIC14.05□□□□□ -0.16
NKX2-1P43699 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-1P43699 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NKX2-1P43699 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-1P43699 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 RBM17P1-201ENST00000453646 1190 ntBASIC14.05□□□□□ -0.16
NKX2-1P43699 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-1P43699 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.05□□□□□ -0.16
NKX2-1P43699 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 AP003071.4-201ENST00000562276 1284 ntBASIC14.05□□□□□ -0.16
NKX2-1P43699 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-1P43699 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 PAUPAR-201ENST00000630360 2965 ntBASIC14.05□□□□□ -0.16
NKX2-1P43699 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-1P43699 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NKX2-1P43699 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-1P43699 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-1P43699 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NKX2-1P43699 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-1P43699 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-1P43699 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-1P43699 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NKX2-1P43699 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NKX2-1P43699 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NKX2-1P43699 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.04□□□□□ -0.16
NKX2-1P43699 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NKX2-1P43699 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms