Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1BP28222 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
HTR1BP28222 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTR1BP28222 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR1BP28222 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.07■□□□□ 0.32
HTR1BP28222 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.07■□□□□ 0.32
HTR1BP28222 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 VN2R19P-201ENST00000442399 1052 ntBASIC17.07■□□□□ 0.32
HTR1BP28222 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
HTR1BP28222 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.07■□□□□ 0.32
HTR1BP28222 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.07■□□□□ 0.32
HTR1BP28222 AC010654.1-201ENST00000615722 808 ntBASIC17.07■□□□□ 0.32
HTR1BP28222 AC139530.3-201ENST00000620344 690 ntBASIC17.07■□□□□ 0.32
HTR1BP28222 AC004790.2-201ENST00000623588 572 ntBASIC17.07■□□□□ 0.32
HTR1BP28222 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HTR1BP28222 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTR1BP28222 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 PI4KAP1-204ENST00000612579 1703 ntBASIC17.07■□□□□ 0.32
HTR1BP28222 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.07■□□□□ 0.32
HTR1BP28222 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTR1BP28222 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 AC006116.8-202ENST00000587620 1550 ntBASIC17.06■□□□□ 0.32
HTR1BP28222 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTR1BP28222 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 AL139384.1-201ENST00000612143 3047 ntBASIC17.06■□□□□ 0.32
HTR1BP28222 LINC00304-203ENST00000565008 1864 ntBASIC17.06■□□□□ 0.32
HTR1BP28222 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTR1BP28222 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.06■□□□□ 0.32
HTR1BP28222 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.06■□□□□ 0.32
HTR1BP28222 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR1BP28222 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.06■□□□□ 0.32
HTR1BP28222 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.06■□□□□ 0.32
HTR1BP28222 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 AC108860.2-201ENST00000562760 2183 ntBASIC17.06■□□□□ 0.32
HTR1BP28222 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HTR1BP28222 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.06■□□□□ 0.32
HTR1BP28222 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.06■□□□□ 0.32
HTR1BP28222 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HTR1BP28222 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HTR1BP28222 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HTR1BP28222 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.05■□□□□ 0.32
HTR1BP28222 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HTR1BP28222 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
HTR1BP28222 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HTR1BP28222 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.05■□□□□ 0.32
HTR1BP28222 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.05■□□□□ 0.32
HTR1BP28222 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.05■□□□□ 0.32
HTR1BP28222 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.05■□□□□ 0.32
HTR1BP28222 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1BP28222 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HTR1BP28222 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.05■□□□□ 0.32
HTR1BP28222 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1BP28222 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.05■□□□□ 0.32
HTR1BP28222 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms