Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.38□□□□□ -0.11
LMO1P25800 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.38□□□□□ -0.11
LMO1P25800 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LMO1P25800 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LMO1P25800 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LMO1P25800 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.38□□□□□ -0.11
LMO1P25800 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
LMO1P25800 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 TSPY19P-201ENST00000418461 509 ntBASIC14.37□□□□□ -0.11
LMO1P25800 LINC00982-205ENST00000420957 435 ntBASIC14.37□□□□□ -0.11
LMO1P25800 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 TSPY18P-201ENST00000441642 509 ntBASIC14.37□□□□□ -0.11
LMO1P25800 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 KRT126P-201ENST00000549467 1181 ntBASIC14.37□□□□□ -0.11
LMO1P25800 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.37□□□□□ -0.11
LMO1P25800 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
LMO1P25800 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 AC092068.3-201ENST00000587894 2016 ntBASIC14.37□□□□□ -0.11
LMO1P25800 AL603756.1-201ENST00000606511 2163 ntBASIC14.37□□□□□ -0.11
LMO1P25800 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LMO1P25800 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LMO1P25800 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 PCDHB17P-201ENST00000539533 2393 ntBASIC14.37□□□□□ -0.11
LMO1P25800 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LMO1P25800 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LMO1P25800 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LMO1P25800 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 LINC02199-201ENST00000506655 2702 ntBASIC14.36□□□□□ -0.11
LMO1P25800 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LMO1P25800 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms