Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRM3P20309 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRM3P20309 AC097637.2-201ENST00000624096 1997 ntBASIC17.07■□□□□ 0.32
CHRM3P20309 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRM3P20309 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHRM3P20309 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.07■□□□□ 0.32
CHRM3P20309 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.07■□□□□ 0.32
CHRM3P20309 AL121761.2-201ENST00000598007 1648 ntBASIC17.07■□□□□ 0.32
CHRM3P20309 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHRM3P20309 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRM3P20309 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 AC004817.3-201ENST00000602957 2129 ntBASIC17.06■□□□□ 0.32
CHRM3P20309 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHRM3P20309 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRM3P20309 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 SIGLEC16-201ENST00000599858 1437 ntBASIC17.06■□□□□ 0.32
CHRM3P20309 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.06■□□□□ 0.32
CHRM3P20309 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.06■□□□□ 0.32
CHRM3P20309 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.06■□□□□ 0.32
CHRM3P20309 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.06■□□□□ 0.32
CHRM3P20309 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHRM3P20309 EGFEM1P-202ENST00000431685 1563 ntBASIC17.06■□□□□ 0.32
CHRM3P20309 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHRM3P20309 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHRM3P20309 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.05■□□□□ 0.32
CHRM3P20309 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 AC106795.1-205ENST00000512851 1056 ntBASIC17.05■□□□□ 0.32
CHRM3P20309 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.05■□□□□ 0.32
CHRM3P20309 MTDHP3-201ENST00000594186 672 ntBASIC17.05■□□□□ 0.32
CHRM3P20309 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHRM3P20309 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRM3P20309 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRM3P20309 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRM3P20309 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRM3P20309 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRM3P20309 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRM3P20309 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHRM3P20309 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHRM3P20309 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRM3P20309 RBM17P3-201ENST00000417687 1192 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms