Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYN1P17600 TMEM14DP-201ENST00000422205 345 ntBASIC18.43■□□□□ 0.54
SYN1P17600 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.43■□□□□ 0.54
SYN1P17600 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.43■□□□□ 0.54
SYN1P17600 SNX29P1-201ENST00000548357 1007 ntBASIC18.43■□□□□ 0.54
SYN1P17600 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.43■□□□□ 0.54
SYN1P17600 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.43■□□□□ 0.54
SYN1P17600 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.43■□□□□ 0.54
SYN1P17600 AC099568.2-201ENST00000609194 695 ntBASIC18.43■□□□□ 0.54
SYN1P17600 AC133552.6-201ENST00000613406 534 ntBASIC18.43■□□□□ 0.54
SYN1P17600 MIR6775-201ENST00000617557 69 ntBASIC18.43■□□□□ 0.54
SYN1P17600 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.43■□□□□ 0.54
SYN1P17600 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.43■□□□□ 0.54
SYN1P17600 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.43■□□□□ 0.54
SYN1P17600 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYN1P17600 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYN1P17600 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYN1P17600 AL391825.1-201ENST00000457671 1364 ntBASIC18.42■□□□□ 0.54
SYN1P17600 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 AP000974.1-201ENST00000623909 2387 ntBASIC18.42■□□□□ 0.54
SYN1P17600 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.42■□□□□ 0.54
SYN1P17600 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 AL353732.1-201ENST00000569618 1459 ntBASIC18.42■□□□□ 0.54
SYN1P17600 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SYN1P17600 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.42■□□□□ 0.54
SYN1P17600 AC234783.1-201ENST00000441761 496 ntBASIC18.42■□□□□ 0.54
SYN1P17600 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.42■□□□□ 0.54
SYN1P17600 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.42■□□□□ 0.54
SYN1P17600 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SYN1P17600 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.42■□□□□ 0.54
SYN1P17600 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.42■□□□□ 0.54
SYN1P17600 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.42■□□□□ 0.54
SYN1P17600 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 AC073592.3-201ENST00000625118 1834 ntBASIC18.42■□□□□ 0.54
SYN1P17600 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SYN1P17600 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SYN1P17600 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SYN1P17600 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.41■□□□□ 0.54
SYN1P17600 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.41■□□□□ 0.54
SYN1P17600 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.41■□□□□ 0.54
SYN1P17600 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.41■□□□□ 0.54
SYN1P17600 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.41■□□□□ 0.54
SYN1P17600 BNIP3P42-201ENST00000454982 569 ntBASIC18.41■□□□□ 0.54
SYN1P17600 DOC2GP-202ENST00000514950 1163 ntBASIC18.41■□□□□ 0.54
SYN1P17600 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.41■□□□□ 0.54
SYN1P17600 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 BNIP3P29-201ENST00000598302 571 ntBASIC18.41■□□□□ 0.54
SYN1P17600 AC011447.5-201ENST00000616168 564 ntBASIC18.41■□□□□ 0.54
SYN1P17600 MIR6787-201ENST00000616675 61 ntBASIC18.41■□□□□ 0.54
SYN1P17600 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SYN1P17600 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.41■□□□□ 0.54
SYN1P17600 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
SYN1P17600 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYN1P17600 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.4■□□□□ 0.54
SYN1P17600 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYN1P17600 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYN1P17600 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYN1P17600 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYN1P17600 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.4■□□□□ 0.54
SYN1P17600 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SYN1P17600 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.4■□□□□ 0.54
SYN1P17600 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms