Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HNRNPDP1-201ENST00000439535 754 ntBASIC17.97■□□□□ 0.47
PDGFRAP16234 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.97■□□□□ 0.47
PDGFRAP16234 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDGFRAP16234 RNA5SP419-201ENST00000515908 135 ntBASIC17.97■□□□□ 0.47
PDGFRAP16234 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDGFRAP16234 AP001005.1-201ENST00000571755 1248 ntBASIC17.97■□□□□ 0.47
PDGFRAP16234 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.97■□□□□ 0.47
PDGFRAP16234 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.97■□□□□ 0.47
PDGFRAP16234 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFRAP16234 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFRAP16234 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDGFRAP16234 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDGFRAP16234 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDGFRAP16234 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFRAP16234 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFRAP16234 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDGFRAP16234 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFRAP16234 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.96■□□□□ 0.47
PDGFRAP16234 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 AL139424.1-201ENST00000607572 797 ntBASIC17.96■□□□□ 0.47
PDGFRAP16234 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
PDGFRAP16234 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFRAP16234 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDGFRAP16234 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFRAP16234 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFRAP16234 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PDGFRAP16234 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PDGFRAP16234 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.95■□□□□ 0.46
PDGFRAP16234 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PDGFRAP16234 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDGFRAP16234 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFRAP16234 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFRAP16234 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFRAP16234 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.95■□□□□ 0.46
PDGFRAP16234 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 AL049840.3-201ENST00000602669 611 ntBASIC17.95■□□□□ 0.46
PDGFRAP16234 AC004706.3-202ENST00000621574 984 ntBASIC17.95■□□□□ 0.46
PDGFRAP16234 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.95■□□□□ 0.46
PDGFRAP16234 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDGFRAP16234 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFRAP16234 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PDGFRAP16234 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PDGFRAP16234 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.94■□□□□ 0.46
PDGFRAP16234 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFRAP16234 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFRAP16234 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.94■□□□□ 0.46
PDGFRAP16234 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDGFRAP16234 FAM215A-202ENST00000632077 792 ntBASIC17.94■□□□□ 0.46
PDGFRAP16234 AC107918.4-202ENST00000641623 219 ntBASIC17.94■□□□□ 0.46
PDGFRAP16234 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDGFRAP16234 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFRAP16234 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms