Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBC1P01850 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBC1P01850 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBC1P01850 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBC1P01850 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBC1P01850 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBC1P01850 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBC1P01850 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBC1P01850 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBC1P01850 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBC1P01850 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBC1P01850 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRBC1P01850 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBC1P01850 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 SLC25A6P2-201ENST00000497974 877 ntBASIC17.12■□□□□ 0.33
TRBC1P01850 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.12■□□□□ 0.33
TRBC1P01850 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 AC106730.1-201ENST00000566722 1090 ntBASIC17.12■□□□□ 0.33
TRBC1P01850 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBC1P01850 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBC1P01850 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBC1P01850 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBC1P01850 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
TRBC1P01850 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRBC1P01850 AL022342.1-201ENST00000400363 863 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBC1P01850 PRSS29P-201ENST00000440800 595 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.11■□□□□ 0.33
TRBC1P01850 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 DUX4L17-201ENST00000557360 1267 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 MIR4751-201ENST00000578027 74 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 AC010654.1-201ENST00000615722 808 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBC1P01850 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.11■□□□□ 0.33
TRBC1P01850 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 ZNF259P1-201ENST00000407656 1365 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 AC002310.6-201ENST00000624451 1377 ntBASIC17.11■□□□□ 0.33
TRBC1P01850 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBC1P01850 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBC1P01850 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRBC1P01850 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBC1P01850 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBC1P01850 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBC1P01850 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms