Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-CO1P00395 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-CO1P00395 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-CO1P00395 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MT-CO1P00395 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
MT-CO1P00395 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-CO1P00395 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
MT-CO1P00395 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 IGHV3-65-201ENST00000523210 341 ntBASIC17.55■□□□□ 0.4
MT-CO1P00395 KRT18P58-201ENST00000527480 1120 ntBASIC17.55■□□□□ 0.4
MT-CO1P00395 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 AC008667.4-201ENST00000607370 168 ntBASIC17.55■□□□□ 0.4
MT-CO1P00395 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.55■□□□□ 0.4
MT-CO1P00395 AL805961.1-202ENST00000641562 540 ntBASIC17.55■□□□□ 0.4
MT-CO1P00395 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MT-CO1P00395 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-CO1P00395 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-CO1P00395 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-CO1P00395 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-CO1P00395 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
MT-CO1P00395 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-CO1P00395 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-CO1P00395 AC108073.2-201ENST00000464002 357 ntBASIC17.54■□□□□ 0.4
MT-CO1P00395 AC140113.2-201ENST00000604370 208 ntBASIC17.54■□□□□ 0.4
MT-CO1P00395 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-CO1P00395 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MT-CO1P00395 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 AL138688.1-201ENST00000624851 1594 ntBASIC17.53■□□□□ 0.4
MT-CO1P00395 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MT-CO1P00395 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
MT-CO1P00395 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.53■□□□□ 0.4
MT-CO1P00395 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MT-CO1P00395 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.53■□□□□ 0.4
MT-CO1P00395 AC007967.2-201ENST00000432613 625 ntBASIC17.53■□□□□ 0.4
MT-CO1P00395 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MT-CO1P00395 AC004790.2-201ENST00000623588 572 ntBASIC17.53■□□□□ 0.4
MT-CO1P00395 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms