Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SIX6O95475 BX276092.7-203ENST00000637198 1536 ntBASIC14.37□□□□□ -0.11
SIX6O95475 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SIX6O95475 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 TSPY6P-201ENST00000448518 926 ntBASIC14.37□□□□□ -0.11
SIX6O95475 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.37□□□□□ -0.11
SIX6O95475 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.37□□□□□ -0.11
SIX6O95475 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.37□□□□□ -0.11
SIX6O95475 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 AP000692.2-201ENST00000608391 879 ntBASIC14.37□□□□□ -0.11
SIX6O95475 AL353708.3-201ENST00000610272 989 ntBASIC14.37□□□□□ -0.11
SIX6O95475 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.37□□□□□ -0.11
SIX6O95475 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SIX6O95475 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SIX6O95475 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SIX6O95475 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SIX6O95475 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.36□□□□□ -0.11
SIX6O95475 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 MIR3180-4-201ENST00000582223 153 ntBASIC14.36□□□□□ -0.11
SIX6O95475 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.36□□□□□ -0.11
SIX6O95475 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.36□□□□□ -0.11
SIX6O95475 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 TNRC18P2-201ENST00000417666 2714 ntBASIC14.36□□□□□ -0.11
SIX6O95475 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIX6O95475 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIX6O95475 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SIX6O95475 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
SIX6O95475 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.35□□□□□ -0.11
SIX6O95475 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIX6O95475 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms