Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 AC007950.2-201ENST00000615045 2347 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.09□□□□□ -0.15
SCAF4O95104 FAM210CP-201ENST00000445714 574 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 AC141257.4-201ENST00000634557 245 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 AC136944.6-201ENST00000634818 245 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SCAF4O95104 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 AC022188.1-201ENST00000620960 1664 ntBASIC14.09□□□□□ -0.15
SCAF4O95104 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SCAF4O95104 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCAF4O95104 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.09□□□□□ -0.15
SCAF4O95104 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.08□□□□□ -0.15
SCAF4O95104 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.08□□□□□ -0.15
SCAF4O95104 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.08□□□□□ -0.15
SCAF4O95104 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SCAF4O95104 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SCAF4O95104 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SCAF4O95104 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCAF4O95104 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.08□□□□□ -0.16
SCAF4O95104 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.08□□□□□ -0.16
SCAF4O95104 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.08□□□□□ -0.16
SCAF4O95104 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.08□□□□□ -0.16
SCAF4O95104 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 AC140113.3-201ENST00000605663 199 ntBASIC14.08□□□□□ -0.16
SCAF4O95104 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SCAF4O95104 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.08□□□□□ -0.16
SCAF4O95104 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.08□□□□□ -0.16
SCAF4O95104 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCAF4O95104 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SCAF4O95104 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SCAF4O95104 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.07□□□□□ -0.16
SCAF4O95104 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SCAF4O95104 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SCAF4O95104 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SCAF4O95104 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCAF4O95104 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms