Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 BX842568.4-201ENST00000421222 227 ntBASIC17.89■□□□□ 0.45
BEST1O76090 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.89■□□□□ 0.45
BEST1O76090 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.89■□□□□ 0.45
BEST1O76090 AC004832.2-201ENST00000426397 482 ntBASIC17.89■□□□□ 0.45
BEST1O76090 AL513480.1-201ENST00000451731 511 ntBASIC17.89■□□□□ 0.45
BEST1O76090 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
BEST1O76090 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.89■□□□□ 0.45
BEST1O76090 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.89■□□□□ 0.45
BEST1O76090 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST1O76090 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
BEST1O76090 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.88■□□□□ 0.45
BEST1O76090 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.88■□□□□ 0.45
BEST1O76090 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 AC002347.1-201ENST00000569543 541 ntBASIC17.88■□□□□ 0.45
BEST1O76090 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
BEST1O76090 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.88■□□□□ 0.45
BEST1O76090 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.88■□□□□ 0.45
BEST1O76090 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
BEST1O76090 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
BEST1O76090 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
BEST1O76090 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST1O76090 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
BEST1O76090 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
BEST1O76090 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 SLC22A20-204ENST00000530038 1673 ntBASIC17.87■□□□□ 0.45
BEST1O76090 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST1O76090 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST1O76090 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST1O76090 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.87■□□□□ 0.45
BEST1O76090 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST1O76090 PDPK2P-202ENST00000562415 1191 ntBASIC17.87■□□□□ 0.45
BEST1O76090 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 AC023141.13-201ENST00000604991 943 ntBASIC17.87■□□□□ 0.45
BEST1O76090 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 TOP3BP1-201ENST00000420768 1380 ntBASIC17.87■□□□□ 0.45
BEST1O76090 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST1O76090 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST1O76090 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
BEST1O76090 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms