Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 ACTG1P4-201ENST00000425123 1122 ntBASIC16.17■□□□□ 0.18
PLOD3O60568 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.17■□□□□ 0.18
PLOD3O60568 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 REXO1L6P-202ENST00000619970 1078 ntBASIC16.17■□□□□ 0.18
PLOD3O60568 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PLOD3O60568 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PLOD3O60568 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.17■□□□□ 0.18
PLOD3O60568 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.17■□□□□ 0.18
PLOD3O60568 LINC02012-201ENST00000608206 1725 ntBASIC16.16■□□□□ 0.18
PLOD3O60568 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PLOD3O60568 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PLOD3O60568 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.16■□□□□ 0.18
PLOD3O60568 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 AL355877.3-201ENST00000622820 899 ntBASIC16.16■□□□□ 0.18
PLOD3O60568 AL139288.1-201ENST00000623748 933 ntBASIC16.16■□□□□ 0.18
PLOD3O60568 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.16■□□□□ 0.18
PLOD3O60568 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
PLOD3O60568 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PLOD3O60568 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.15■□□□□ 0.18
PLOD3O60568 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PLOD3O60568 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.15■□□□□ 0.18
PLOD3O60568 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.15■□□□□ 0.18
PLOD3O60568 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PLOD3O60568 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.15■□□□□ 0.18
PLOD3O60568 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.15■□□□□ 0.18
PLOD3O60568 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PLOD3O60568 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PLOD3O60568 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PLOD3O60568 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PLOD3O60568 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms