Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCC4O15439 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 MRPL20P1-201ENST00000400819 433 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.66■■□□□ 1.06
ABCC4O15439 CNN2P11-201ENST00000429351 262 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 AC087163.2-201ENST00000457299 853 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.66■■□□□ 1.06
ABCC4O15439 RFPL4AP1-201ENST00000530883 850 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 PDPK2P-202ENST00000562415 1191 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 AC005915.1-201ENST00000624912 2018 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 AC105020.1-201ENST00000435356 2205 ntBASIC21.66■■□□□ 1.06
ABCC4O15439 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCC4O15439 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCC4O15439 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.66■■□□□ 1.06
ABCC4O15439 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCC4O15439 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ABCC4O15439 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ABCC4O15439 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.65■■□□□ 1.06
ABCC4O15439 CYMP-203ENST00000474680 1263 ntBASIC21.65■■□□□ 1.06
ABCC4O15439 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
ABCC4O15439 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ABCC4O15439 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.65■■□□□ 1.06
ABCC4O15439 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCC4O15439 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
ABCC4O15439 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ABCC4O15439 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ABCC4O15439 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCC4O15439 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.64■■□□□ 1.05
ABCC4O15439 SLC25A6P2-201ENST00000497974 877 ntBASIC21.64■■□□□ 1.05
ABCC4O15439 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
ABCC4O15439 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.64■■□□□ 1.05
ABCC4O15439 AC004877.2-201ENST00000623941 599 ntBASIC21.64■■□□□ 1.05
ABCC4O15439 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.64■■□□□ 1.05
ABCC4O15439 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.64■■□□□ 1.05
ABCC4O15439 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
ABCC4O15439 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ABCC4O15439 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.63■■□□□ 1.05
ABCC4O15439 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
ABCC4O15439 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ABCC4O15439 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCC4O15439 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ABCC4O15439 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCC4O15439 KRT19P2-202ENST00000557173 1012 ntBASIC21.63■■□□□ 1.05
ABCC4O15439 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.63■■□□□ 1.05
ABCC4O15439 AC096734.2-201ENST00000562054 433 ntBASIC21.63■■□□□ 1.05
ABCC4O15439 AL031432.2-201ENST00000566714 459 ntBASIC21.63■■□□□ 1.05
ABCC4O15439 AL928711.1-201ENST00000570165 459 ntBASIC21.63■■□□□ 1.05
ABCC4O15439 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms