Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDLIM1O00151 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.36■□□□□ 0.21
PDLIM1O00151 HOMER2P1-201ENST00000455653 964 ntBASIC16.36■□□□□ 0.21
PDLIM1O00151 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 AL590326.2-201ENST00000625139 305 ntBASIC16.36■□□□□ 0.21
PDLIM1O00151 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM1O00151 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM1O00151 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM1O00151 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 CICP13-201ENST00000422015 2789 ntBASIC16.35■□□□□ 0.21
PDLIM1O00151 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PDLIM1O00151 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.35■□□□□ 0.21
PDLIM1O00151 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.35■□□□□ 0.21
PDLIM1O00151 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 AC024243.1-201ENST00000609234 778 ntBASIC16.35■□□□□ 0.21
PDLIM1O00151 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 LINC02012-201ENST00000608206 1725 ntBASIC16.35■□□□□ 0.21
PDLIM1O00151 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PDLIM1O00151 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PDLIM1O00151 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.35■□□□□ 0.21
PDLIM1O00151 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PDLIM1O00151 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
PDLIM1O00151 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 AC104581.4-201ENST00000623126 3052 ntBASIC16.34■□□□□ 0.21
PDLIM1O00151 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 STARP1-201ENST00000397973 869 ntBASIC16.34■□□□□ 0.21
PDLIM1O00151 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.34■□□□□ 0.21
PDLIM1O00151 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.34■□□□□ 0.21
PDLIM1O00151 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.34■□□□□ 0.21
PDLIM1O00151 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.34■□□□□ 0.21
PDLIM1O00151 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PDLIM1O00151 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms