Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 GPALPP1-207ENST00000611650 899 ntBASIC19.22■□□□□ 0.67
DDX39AO00148 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX39AO00148 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX39AO00148 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX39AO00148 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DDX39AO00148 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDX39AO00148 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.21■□□□□ 0.67
DDX39AO00148 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 AC096734.2-201ENST00000562054 433 ntBASIC19.21■□□□□ 0.67
DDX39AO00148 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX39AO00148 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 AC139530.3-201ENST00000620344 690 ntBASIC19.21■□□□□ 0.67
DDX39AO00148 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDX39AO00148 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.21■□□□□ 0.67
DDX39AO00148 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX39AO00148 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
DDX39AO00148 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DDX39AO00148 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 AC025580.3-201ENST00000617932 1424 ntBASIC19.2■□□□□ 0.66
DDX39AO00148 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 AC004832.2-201ENST00000426397 482 ntBASIC19.2■□□□□ 0.66
DDX39AO00148 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX39AO00148 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.2■□□□□ 0.66
DDX39AO00148 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.2■□□□□ 0.66
DDX39AO00148 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX39AO00148 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX39AO00148 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX39AO00148 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX39AO00148 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DDX39AO00148 RPSAP43-201ENST00000402237 625 ntBASIC19.19■□□□□ 0.66
DDX39AO00148 UPF3AP3-201ENST00000420996 769 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms