Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DUX4L16-201ENST00000555130 1264 ntBASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC006538.1-201ENST00000567905 1585 ntBASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC006486.2-201ENST00000624246 2199 ntBASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC231657.2-201ENST00000624556 255 ntBASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.96□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 CYP2T1P-201ENST00000432607 1285 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 CNN2P6-201ENST00000439038 900 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 RARRES2P4-201ENST00000514074 484 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 AC069236.1-201ENST00000604339 616 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 LINC01451-201ENST00000623792 534 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 AC008694.1-202ENST00000636953 945 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 HLA-A-202ENST00000376806 1854 ntBASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 HTR7P1-201ENST00000538670 1336 ntBASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 LINC00552-201ENST00000625151 2579 ntBASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BOLA2-SMG1P6H3BVE0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms