Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM49D1C9J1S8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC092364.2-201ENST00000596710 2692 ntBASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AL645929.1-201ENST00000420084 975 ntBASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC011840.4-201ENST00000578471 627 ntBASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AL162727.3-201ENST00000635661 2787 ntBASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM49D1C9J1S8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 FER1L4-210ENST00000615531 5998 ntBASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 PCDHA1-201ENST00000378133 2726 ntBASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AL645728.1-201ENST00000366221 2101 ntBASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM49D1C9J1S8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms