Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 UBE2SP1-201ENST00000450587 669 ntBASIC12.07□□□□□ -0.48
LINC01546A6NGU7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 NEK4P2-201ENST00000580004 1012 ntBASIC12.07□□□□□ -0.48
LINC01546A6NGU7 AC013467.2-201ENST00000605472 835 ntBASIC12.07□□□□□ -0.48
LINC01546A6NGU7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01546A6NGU7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AC016027.1-202ENST00000607927 1699 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CDC14C-201ENST00000428251 1719 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AL135905.2-201ENST00000584934 1404 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ESRRAP1-201ENST00000400596 1257 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 STK25P1-201ENST00000585406 838 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AL109923.1-201ENST00000618799 583 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 AC116562.4-202ENST00000641738 218 ntBASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC01546A6NGU7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms