Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AL355306.1-201ENST00000415580 579 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SPDYE11-202ENST00000450699 704 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AC023141.5-201ENST00000458585 616 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SPDYE9P-201ENST00000570642 692 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AC005412.3-201ENST00000580309 715 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 LINC02084-201ENST00000606069 1096 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SPDYE10P-202ENST00000612005 668 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 SPDYE8P-202ENST00000612377 668 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 AL390961.4-201ENST00000623958 2535 ntBASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3BA6NDS4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 MIR770-201ENST00000390219 98 ntBASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 HLA-J-203ENST00000494367 1087 ntBASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 AC099522.2-201ENST00000607001 744 ntBASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 AC012569.1-201ENST00000591191 1524 ntBASIC17.31■□□□□ 0.36
TBC1D3BA6NDS4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 AC005237.2-201ENST00000434368 219 ntBASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 LINC00628-201ENST00000628516 1289 ntBASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3BA6NDS4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 HMGA1P7-201ENST00000406908 502 ntBASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 TFAMP1-201ENST00000412727 736 ntBASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 ADH5P3-201ENST00000433842 1137 ntBASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.29■□□□□ 0.36
TBC1D3BA6NDS4 KRT8P48-201ENST00000515599 1220 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms