Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC25.05■■□□□ 1.6
HFM1A2PYH4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 CDK2AP2P3-201ENST00000422476 372 ntBASIC25.05■■□□□ 1.6
HFM1A2PYH4 CNN2P11-201ENST00000429351 262 ntBASIC25.05■■□□□ 1.6
HFM1A2PYH4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.05■■□□□ 1.6
HFM1A2PYH4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
HFM1A2PYH4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 AP001350.2-201ENST00000625104 1094 ntBASIC25.05■■□□□ 1.6
HFM1A2PYH4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC25.05■■□□□ 1.6
HFM1A2PYH4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
HFM1A2PYH4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HFM1A2PYH4 AKAP8P1-201ENST00000434743 1349 ntBASIC25.05■■□□□ 1.6
HFM1A2PYH4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 AC093520.2-201ENST00000561830 333 ntBASIC25.04■■□□□ 1.6
HFM1A2PYH4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 AL139011.1-202ENST00000642063 584 ntBASIC25.04■■□□□ 1.6
HFM1A2PYH4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC25.04■■□□□ 1.6
HFM1A2PYH4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HFM1A2PYH4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AL645728.1-201ENST00000366221 2101 ntBASIC25.03■■□□□ 1.6
HFM1A2PYH4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC25.03■■□□□ 1.6
HFM1A2PYH4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 AC026120.1-201ENST00000611536 926 ntBASIC25.03■■□□□ 1.6
HFM1A2PYH4 AL161645.1-201ENST00000622716 1255 ntBASIC25.03■■□□□ 1.6
HFM1A2PYH4 WASH6P-202ENST00000359512 1437 ntBASIC25.03■■□□□ 1.6
HFM1A2PYH4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HFM1A2PYH4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 AL671710.1-201ENST00000610245 2349 ntBASIC25.02■■□□□ 1.6
HFM1A2PYH4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 AC243562.1-201ENST00000560672 389 ntBASIC25.02■■□□□ 1.6
HFM1A2PYH4 AC009093.7-201ENST00000623853 1223 ntBASIC25.02■■□□□ 1.6
HFM1A2PYH4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 AC016027.1-202ENST00000607927 1699 ntBASIC25.02■■□□□ 1.6
HFM1A2PYH4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC25.02■■□□□ 1.6
HFM1A2PYH4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HFM1A2PYH4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC25.01■■□□□ 1.6
HFM1A2PYH4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms