Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC007967.3-201ENST00000434308 558 ntBASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 RASA4DP-201ENST00000460726 1199 ntBASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 STK25P1-201ENST00000585406 838 ntBASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TCRBV3S1A0A5B6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 AC144831.1-201ENST00000573312 2656 ntBASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 HMGA1P5-201ENST00000412453 271 ntBASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 ECEL1P3-201ENST00000427961 737 ntBASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 ECEL1P2-202ENST00000465689 757 ntBASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TCRBV3S1A0A5B6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 AP003733.1-201ENST00000491725 852 ntBASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TCRBV3S1A0A5B6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms