Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC196A0A1B0GTZ2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC196A0A1B0GTZ2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC196A0A1B0GTZ2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 RPS15P9-201ENST00000494093 319 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC093909.1-201ENST00000504731 1122 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 AL356488.2-201ENST00000602755 427 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 PI4KAP1-204ENST00000612579 1703 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 GGTLC5P-201ENST00000617623 998 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 AL021920.2-201ENST00000624828 1351 ntBASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC196A0A1B0GTZ2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC092068.3-201ENST00000587894 2016 ntBASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC196A0A1B0GTZ2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 PRORSD1P-202ENST00000563365 2154 ntBASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 AP001005.1-201ENST00000571755 1248 ntBASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC005593.1-201ENST00000624894 515 ntBASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC196A0A1B0GTZ2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms