Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX9Q9Y5X1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 SLC25A6P2-201ENST00000497974 877 ntBASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 LTB4R2-202ENST00000528054 3092 ntBASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX9Q9Y5X1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 LINC02012-201ENST00000608206 1725 ntBASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 IGLL3P-201ENST00000412472 434 ntBASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PGAM5P1-201ENST00000518923 814 ntBASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX9Q9Y5X1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms