Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA3Q9Y5H0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA3Q9Y5H0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA3Q9Y5H0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA3Q9Y5H0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA3Q9Y5H0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 AL162727.3-201ENST00000635661 2787 ntBASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 MCCD1P2-201ENST00000423228 335 ntBASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 AL049757.1-201ENST00000616842 1596 ntBASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA3Q9Y5H0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AD000864.1-201ENST00000624076 2295 ntBASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC134684.3-201ENST00000641758 218 ntBASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA3Q9Y5H0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 AC132938.5-201ENST00000624980 1813 ntBASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 AC003669.1-201ENST00000334569 611 ntBASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 AC023274.1-201ENST00000418278 595 ntBASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 PMS2P2-201ENST00000425039 1128 ntBASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGA3Q9Y5H0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms