Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 AC105233.2-201ENST00000523697 349 ntBASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 AF228730.5-201ENST00000530288 346 ntBASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RTCBQ9Y3I0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 HLA-V-204ENST00000476601 1289 ntBASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTCBQ9Y3I0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 ATP5G2P4-201ENST00000442175 420 ntBASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.36■■□□□ 1.01
RTCBQ9Y3I0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 AC131009.4-201ENST00000624048 1740 ntBASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.35■■□□□ 1.01
RTCBQ9Y3I0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms