Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4E1Q9UPM8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP4E1Q9UPM8 AC105020.1-201ENST00000435356 2205 ntBASIC17.78■□□□□ 0.44
AP4E1Q9UPM8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 RPS2P1-201ENST00000434010 821 ntBASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 FAM197Y8-203ENST00000450145 560 ntBASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.77■□□□□ 0.44
AP4E1Q9UPM8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4E1Q9UPM8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4E1Q9UPM8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.77■□□□□ 0.43
AP4E1Q9UPM8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AP4E1Q9UPM8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP4E1Q9UPM8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 AP002414.1-201ENST00000391405 1147 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 ELK2BP-201ENST00000415014 1224 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RNPS1P1-201ENST00000507437 918 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 OR7E14P-202ENST00000530490 1290 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 AL031008.1-201ENST00000619963 541 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 AC243591.1-201ENST00000452967 1364 ntBASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP4E1Q9UPM8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 FAAHP1-202ENST00000446499 1238 ntBASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 AC018712.1-201ENST00000455767 687 ntBASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4E1Q9UPM8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms