Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AP002414.1-201ENST00000391405 1147 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AL645929.1-201ENST00000420084 975 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AL596275.1-201ENST00000423464 877 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 TSPY22P-201ENST00000427496 604 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 NUS1P1-201ENST00000446295 882 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AC073592.5-201ENST00000624854 528 ntBASIC16.91■□□□□ 0.3
MKS1Q9NXB0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
MKS1Q9NXB0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AC105917.1-201ENST00000506637 2539 ntBASIC16.9■□□□□ 0.3
MKS1Q9NXB0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AC097493.4-201ENST00000641197 219 ntBASIC16.9■□□□□ 0.3
MKS1Q9NXB0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MKS1Q9NXB0 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.3
MKS1Q9NXB0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MKS1Q9NXB0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MKS1Q9NXB0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
MKS1Q9NXB0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 AC013467.2-201ENST00000605472 835 ntBASIC16.89■□□□□ 0.29
MKS1Q9NXB0 AC006011.2-201ENST00000621313 1158 ntBASIC16.89■□□□□ 0.29
MKS1Q9NXB0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms