Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 AC079328.2-201ENST00000561241 3354 ntBASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCM2LQ9NUG4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 NEK4P2-201ENST00000580004 1012 ntBASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 AC024243.1-201ENST00000609234 778 ntBASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 AC105917.1-201ENST00000506637 2539 ntBASIC16.34■□□□□ 0.21
CCM2LQ9NUG4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 LINC00554-201ENST00000564841 3011 ntBASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCM2LQ9NUG4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 AC132872.4-202ENST00000622924 2756 ntBASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCM2LQ9NUG4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms