Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 AC006504.4-201ENST00000592118 1568 ntBASIC17.55■□□□□ 0.4
SP110Q9HB58 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SP110Q9HB58 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.55■□□□□ 0.4
SP110Q9HB58 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.55■□□□□ 0.4
SP110Q9HB58 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.55■□□□□ 0.4
SP110Q9HB58 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.55■□□□□ 0.4
SP110Q9HB58 AC105339.3-201ENST00000560043 636 ntBASIC17.55■□□□□ 0.4
SP110Q9HB58 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.55■□□□□ 0.4
SP110Q9HB58 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.55■□□□□ 0.4
SP110Q9HB58 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 AC012313.1-201ENST00000593393 3059 ntBASIC17.55■□□□□ 0.4
SP110Q9HB58 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SP110Q9HB58 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.54■□□□□ 0.4
SP110Q9HB58 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.54■□□□□ 0.4
SP110Q9HB58 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.54■□□□□ 0.4
SP110Q9HB58 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.54■□□□□ 0.4
SP110Q9HB58 MIR7706-201ENST00000613747 67 ntBASIC17.54■□□□□ 0.4
SP110Q9HB58 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 AP001094.4-201ENST00000579008 2176 ntBASIC17.54■□□□□ 0.4
SP110Q9HB58 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SP110Q9HB58 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SP110Q9HB58 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SP110Q9HB58 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SP110Q9HB58 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SP110Q9HB58 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SP110Q9HB58 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 KRT18P27-201ENST00000427733 1299 ntBASIC17.53■□□□□ 0.4
SP110Q9HB58 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.53■□□□□ 0.4
SP110Q9HB58 AC136632.2-201ENST00000512891 861 ntBASIC17.53■□□□□ 0.4
SP110Q9HB58 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.53■□□□□ 0.4
SP110Q9HB58 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 AC012640.2-201ENST00000561606 901 ntBASIC17.53■□□□□ 0.4
SP110Q9HB58 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 AL049840.3-201ENST00000602669 611 ntBASIC17.53■□□□□ 0.4
SP110Q9HB58 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
SP110Q9HB58 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
SP110Q9HB58 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SP110Q9HB58 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms