Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AP002414.4-201ENST00000589764 1148 ntBASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 Z69720.1-201ENST00000601483 472 ntBASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB1Q9H4B7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 SPDYE21P-201ENST00000413323 827 ntBASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 MINOS1P3-201ENST00000457048 203 ntBASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 CICP6-201ENST00000457191 2729 ntBASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB1Q9H4B7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 TUBB8P12-201ENST00000308911 1335 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 TUBB7P-202ENST00000428444 1305 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 TUBB8P7-204ENST00000567960 1332 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 PCED1CP-201ENST00000419887 785 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 AL020989.1-201ENST00000422979 469 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 KRT18P21-201ENST00000515767 1272 ntBASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TUBB1Q9H4B7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms