Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PHACTR1Q9C0D0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 LINC00895-201ENST00000629028 1637 ntBASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 AC063952.2-201ENST00000498792 1227 ntBASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 MTHFR-217ENST00000641820 1569 ntBASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PHACTR1Q9C0D0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PHACTR1Q9C0D0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PHACTR1Q9C0D0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PHACTR1Q9C0D0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PHACTR1Q9C0D0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.39■□□□□ 0.37
PHACTR1Q9C0D0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AL391256.1-201ENST00000443260 1855 ntBASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AL671277.2-201ENST00000458060 996 ntBASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 VENTXP7-201ENST00000475503 772 ntBASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 KRT8P26-201ENST00000534154 1276 ntBASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 AC073592.5-201ENST00000624854 528 ntBASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHACTR1Q9C0D0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms