Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE2OQ9C0C9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 AC009336.1-201ENST00000608941 1553 ntBASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 AC012313.1-201ENST00000593393 3059 ntBASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 AC092580.3-201ENST00000430932 139 ntBASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 AC017083.2-201ENST00000608069 979 ntBASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE2OQ9C0C9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 MRPS18AP1-201ENST00000414458 589 ntBASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 RPS2P32-201ENST00000439199 892 ntBASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 IGHV3-52-201ENST00000519770 353 ntBASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE2OQ9C0C9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 AC135050.7-201ENST00000624508 2218 ntBASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
UBE2OQ9C0C9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBE2OQ9C0C9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms