Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 PDPK2P-202ENST00000562415 1191 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AL353135.1-201ENST00000606729 504 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AL121761.2-201ENST00000598007 1648 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP1Q9BWH6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 METTL21AP1-201ENST00000438852 635 ntBASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 AC004790.2-201ENST00000623588 572 ntBASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 AL135999.2-201ENST00000622438 1686 ntBASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP1Q9BWH6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 ELL2P1-201ENST00000413990 1906 ntBASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.73■□□□□ 0.91
RPAP1Q9BWH6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 HTR5BP-201ENST00000430851 1154 ntBASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AL078644.1-201ENST00000609881 752 ntBASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.72■□□□□ 0.91
RPAP1Q9BWH6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP1Q9BWH6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP1Q9BWH6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.71■□□□□ 0.91
RPAP1Q9BWH6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.71■□□□□ 0.91
RPAP1Q9BWH6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP1Q9BWH6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms