Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM62Q9BVG3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 AL022342.1-201ENST00000400363 863 ntBASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 VN2R19P-201ENST00000442399 1052 ntBASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 AP002490.2-201ENST00000524791 560 ntBASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 AC004790.2-201ENST00000623588 572 ntBASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM62Q9BVG3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 AC002310.6-201ENST00000624451 1377 ntBASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 AC034105.1-201ENST00000563488 319 ntBASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM62Q9BVG3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 AC027601.4-201ENST00000611259 610 ntBASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM62Q9BVG3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms