Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 PMPCAP1-201ENST00000508114 1576 ntBASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
YIPF4Q9BSR8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AL121761.2-201ENST00000598007 1648 ntBASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AC148477.5-201ENST00000625164 1645 ntBASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 NUS1P1-201ENST00000446295 882 ntBASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 AC092068.3-201ENST00000587894 2016 ntBASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
YIPF4Q9BSR8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 AL121772.3-201ENST00000610840 674 ntBASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.15■□□□□ 0.18
YIPF4Q9BSR8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
YIPF4Q9BSR8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
YIPF4Q9BSR8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
YIPF4Q9BSR8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.14■□□□□ 0.18
YIPF4Q9BSR8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF4Q9BSR8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF4Q9BSR8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
YIPF4Q9BSR8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.14■□□□□ 0.17
YIPF4Q9BSR8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
YIPF4Q9BSR8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms