Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 TSPY26P-202ENST00000565928 3884 ntBASIC13.93□□□□□ -0.18
RAB40CQ96S21 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.93□□□□□ -0.18
RAB40CQ96S21 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 NAPSB-206ENST00000562112 1266 ntBASIC13.93□□□□□ -0.18
RAB40CQ96S21 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 AL596257.1-201ENST00000641463 2694 ntBASIC13.93□□□□□ -0.18
RAB40CQ96S21 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RAB40CQ96S21 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB40CQ96S21 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 AC097374.2-201ENST00000618617 1306 ntBASIC13.92□□□□□ -0.18
RAB40CQ96S21 FLJ16779-201ENST00000612722 7638 ntBASIC13.92□□□□□ -0.18
RAB40CQ96S21 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 KRT18P48-201ENST00000434763 852 ntBASIC13.92□□□□□ -0.18
RAB40CQ96S21 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 CYP2D8P-201ENST00000433633 1490 ntBASIC13.92□□□□□ -0.18
RAB40CQ96S21 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB40CQ96S21 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB40CQ96S21 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40CQ96S21 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms