Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BBS4Q96RK4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BBS4Q96RK4 AC148477.5-201ENST00000625164 1645 ntBASIC16.27■□□□□ 0.2
BBS4Q96RK4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BBS4Q96RK4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BBS4Q96RK4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BBS4Q96RK4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 PRELID1P1-202ENST00000567272 903 ntBASIC16.27■□□□□ 0.2
BBS4Q96RK4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.27■□□□□ 0.2
BBS4Q96RK4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 AL732292.2-201ENST00000609649 430 ntBASIC16.27■□□□□ 0.2
BBS4Q96RK4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
BBS4Q96RK4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BBS4Q96RK4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
BBS4Q96RK4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BBS4Q96RK4 AP005117.1-201ENST00000584346 1413 ntBASIC16.27■□□□□ 0.19
BBS4Q96RK4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BBS4Q96RK4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
BBS4Q96RK4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BBS4Q96RK4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BBS4Q96RK4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC079776.2-201ENST00000641154 1609 ntBASIC16.26■□□□□ 0.19
BBS4Q96RK4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC009053.2-201ENST00000563701 2365 ntBASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC097637.2-201ENST00000624096 1997 ntBASIC16.26■□□□□ 0.19
BBS4Q96RK4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BBS4Q96RK4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
BBS4Q96RK4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 AC092053.1-201ENST00000605787 1936 ntBASIC16.25■□□□□ 0.19
BBS4Q96RK4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BBS4Q96RK4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 AP001269.4-201ENST00000609611 512 ntBASIC16.25■□□□□ 0.19
BBS4Q96RK4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BBS4Q96RK4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms