Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SNX27Q96L92 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.41■□□□□ 0.54
SNX27Q96L92 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.41■□□□□ 0.54
SNX27Q96L92 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SNX27Q96L92 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.41■□□□□ 0.54
SNX27Q96L92 AL513480.1-201ENST00000451731 511 ntBASIC18.41■□□□□ 0.54
SNX27Q96L92 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.41■□□□□ 0.54
SNX27Q96L92 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.41■□□□□ 0.54
SNX27Q96L92 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.41■□□□□ 0.54
SNX27Q96L92 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.41■□□□□ 0.54
SNX27Q96L92 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SNX27Q96L92 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SNX27Q96L92 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX27Q96L92 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 LINC02012-201ENST00000608206 1725 ntBASIC18.4■□□□□ 0.54
SNX27Q96L92 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.4■□□□□ 0.54
SNX27Q96L92 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNX27Q96L92 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.4■□□□□ 0.54
SNX27Q96L92 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.4■□□□□ 0.54
SNX27Q96L92 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNX27Q96L92 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.4■□□□□ 0.54
SNX27Q96L92 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.4■□□□□ 0.54
SNX27Q96L92 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.4■□□□□ 0.54
SNX27Q96L92 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNX27Q96L92 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX27Q96L92 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
SNX27Q96L92 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNX27Q96L92 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX27Q96L92 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNX27Q96L92 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNX27Q96L92 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNX27Q96L92 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNX27Q96L92 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNX27Q96L92 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX27Q96L92 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX27Q96L92 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX27Q96L92 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX27Q96L92 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.39■□□□□ 0.53
SNX27Q96L92 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNX27Q96L92 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.39■□□□□ 0.53
SNX27Q96L92 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX27Q96L92 AC074386.1-202ENST00000463561 864 ntBASIC18.39■□□□□ 0.53
SNX27Q96L92 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNX27Q96L92 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX27Q96L92 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX27Q96L92 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.39■□□□□ 0.53
SNX27Q96L92 AL078644.1-201ENST00000609881 752 ntBASIC18.39■□□□□ 0.53
SNX27Q96L92 AC012645.4-201ENST00000610691 1061 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms