Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 TSPY22P-201ENST00000427496 604 ntBASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHAMP1Q96JM3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 HOMER2P1-201ENST00000455653 964 ntBASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 KRT18P56-201ENST00000507275 550 ntBASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 AL353593.2-201ENST00000602529 1483 ntBASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CHAMP1Q96JM3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 CYP2T1P-202ENST00000641596 2535 ntBASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 MYCLP1-201ENST00000372451 1075 ntBASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AL645929.1-201ENST00000420084 975 ntBASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHAMP1Q96JM3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms