Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 STK25P1-201ENST00000585406 838 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AC099568.2-201ENST00000609194 695 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 AL138828.2-201ENST00000615812 383 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 AL109936.8-201ENST00000641772 604 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 AL499627.1-201ENST00000569373 2188 ntBASIC18.45■□□□□ 0.54
LRCH3Q96II8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.45■□□□□ 0.54
LRCH3Q96II8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRCH3Q96II8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 AC093677.2-201ENST00000600169 1863 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 ACTBP11-201ENST00000436287 1126 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 SLC25A6P2-201ENST00000497974 877 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 WASH4P-201ENST00000564273 1246 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 AL161645.1-201ENST00000622716 1255 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 AL031598.1-201ENST00000561511 1773 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRCH3Q96II8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 AL133373.2-201ENST00000623187 2828 ntBASIC18.44■□□□□ 0.54
LRCH3Q96II8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
LRCH3Q96II8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 AL390961.4-201ENST00000623958 2535 ntBASIC18.43■□□□□ 0.54
LRCH3Q96II8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH3Q96II8 AC135050.7-201ENST00000624508 2218 ntBASIC18.43■□□□□ 0.54
LRCH3Q96II8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH3Q96II8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 AC009477.1-201ENST00000452936 217 ntBASIC18.42■□□□□ 0.54
LRCH3Q96II8 BNIP3P42-201ENST00000454982 569 ntBASIC18.42■□□□□ 0.54
LRCH3Q96II8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH3Q96II8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 SNX29P1-201ENST00000548357 1007 ntBASIC18.42■□□□□ 0.54
LRCH3Q96II8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH3Q96II8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms