Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 HLA-A-201ENST00000376802 1334 ntBASIC17.55■□□□□ 0.4
CCDC97Q96F63 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 KRT18P13-201ENST00000400056 1290 ntBASIC17.55■□□□□ 0.4
CCDC97Q96F63 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC97Q96F63 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC97Q96F63 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 AC141586.5-201ENST00000624546 2050 ntBASIC17.54■□□□□ 0.4
CCDC97Q96F63 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 SIRPAP1-201ENST00000448467 1770 ntBASIC17.54■□□□□ 0.4
CCDC97Q96F63 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MRPL3P1-201ENST00000400109 1033 ntBASIC17.54■□□□□ 0.4
CCDC97Q96F63 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC97Q96F63 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC97Q96F63 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 AC124067.4-201ENST00000519691 2379 ntBASIC17.53■□□□□ 0.4
CCDC97Q96F63 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 AC096582.2-201ENST00000510860 516 ntBASIC17.53■□□□□ 0.4
CCDC97Q96F63 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 AP001005.1-201ENST00000571755 1248 ntBASIC17.53■□□□□ 0.4
CCDC97Q96F63 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC97Q96F63 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC97Q96F63 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms