Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.3■□□□□ 0.2
NMD3Q96D46 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.3■□□□□ 0.2
NMD3Q96D46 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NMD3Q96D46 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NMD3Q96D46 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.3■□□□□ 0.2
NMD3Q96D46 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NMD3Q96D46 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NMD3Q96D46 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
NMD3Q96D46 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NMD3Q96D46 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
NMD3Q96D46 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NMD3Q96D46 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NMD3Q96D46 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.29■□□□□ 0.2
NMD3Q96D46 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.29■□□□□ 0.2
NMD3Q96D46 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.29■□□□□ 0.2
NMD3Q96D46 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NMD3Q96D46 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NMD3Q96D46 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.29■□□□□ 0.2
NMD3Q96D46 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 NORAD-201ENST00000565493 5339 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 TCAF2P1-201ENST00000291129 2421 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 KRT18P22-201ENST00000402024 1347 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NMD3Q96D46 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 ECEL1P3-201ENST00000427961 737 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.28■□□□□ 0.2
NMD3Q96D46 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 AL512604.3-201ENST00000569583 964 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 NEK4P2-201ENST00000580004 1012 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 AC012306.2-201ENST00000609350 630 ntBASIC16.28■□□□□ 0.2
NMD3Q96D46 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NMD3Q96D46 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NMD3Q96D46 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NMD3Q96D46 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
NMD3Q96D46 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NMD3Q96D46 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.27■□□□□ 0.2
NMD3Q96D46 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NMD3Q96D46 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms