Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC132938.5-201ENST00000624980 1813 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC098831.1-202ENST00000438821 336 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 STK19B-204ENST00000512515 211 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 IGHV3-22-201ENST00000520721 359 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 SLC25A1P1-201ENST00000528351 927 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC145285.3-201ENST00000564603 959 ntBASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 STK25P1-201ENST00000585406 838 ntBASIC17■□□□□ 0.31
SH3KBP1Q96B97 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SH3KBP1Q96B97 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17■□□□□ 0.31
SH3KBP1Q96B97 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AC108860.2-201ENST00000562760 2183 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 NCF1C-201ENST00000438382 1427 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AC005104.2-201ENST00000427818 678 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms