Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 AC142381.1-201ENST00000426099 345 ntBASIC21.71■■□□□ 1.07
SMARCC1Q92922 AC007274.1-201ENST00000439805 662 ntBASIC21.71■■□□□ 1.07
SMARCC1Q92922 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
SMARCC1Q92922 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 BX323043.1-201ENST00000641006 1765 ntBASIC21.7■■□□□ 1.06
SMARCC1Q92922 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 AC105233.2-201ENST00000523697 349 ntBASIC21.7■■□□□ 1.06
SMARCC1Q92922 AF228730.5-201ENST00000530288 346 ntBASIC21.7■■□□□ 1.06
SMARCC1Q92922 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 AC007967.4-201ENST00000614700 386 ntBASIC21.7■■□□□ 1.06
SMARCC1Q92922 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC1Q92922 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SMARCC1Q92922 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 SPTLC1P1-201ENST00000447199 261 ntBASIC21.69■■□□□ 1.06
SMARCC1Q92922 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 SPDYE12P-201ENST00000618416 771 ntBASIC21.69■■□□□ 1.06
SMARCC1Q92922 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC1Q92922 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 AC093503.3-201ENST00000624917 2352 ntBASIC21.69■■□□□ 1.06
SMARCC1Q92922 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.69■■□□□ 1.06
SMARCC1Q92922 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 HLA-V-204ENST00000476601 1289 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 AC073389.1-201ENST00000595595 795 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 AC003101.2-201ENST00000612557 442 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 AL138828.2-201ENST00000615812 383 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 AP3S2-216ENST00000617003 1561 ntBASIC21.68■■□□□ 1.06
SMARCC1Q92922 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SMARCC1Q92922 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMARCC1Q92922 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms