Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 RN7SL204P-201ENST00000582831 262 ntBASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 MIR6080-201ENST00000617359 66 ntBASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 AL390754.1-201ENST00000619088 582 ntBASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AL354751.1-201ENST00000412768 1863 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 UGT1A2P-201ENST00000454886 866 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 ALG1L8P-201ENST00000533887 760 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AC087641.1-201ENST00000557561 1021 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AC027307.2-201ENST00000591252 911 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AF228730.6-201ENST00000641497 218 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AC084121.3-201ENST00000641716 218 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 AC105233.6-201ENST00000642093 218 ntBASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAPGEF4Q8WZA2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 MIR661-201ENST00000384842 89 ntBASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AC015922.1-201ENST00000421102 1152 ntBASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AP000842.3-202ENST00000569238 1080 ntBASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 MIR3909-201ENST00000579518 119 ntBASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AL158211.3-201ENST00000607385 239 ntBASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAPGEF4Q8WZA2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms