Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 FRMD8P1-201ENST00000440433 1524 ntBASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L1Q8WWY6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 LINC02228-204ENST00000642115 2962 ntBASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TSPY17P-201ENST00000450329 467 ntBASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AC116562.2-201ENST00000507042 360 ntBASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AL603832.2-201ENST00000566195 2125 ntBASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MBD3L1Q8WWY6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AC009154.2-201ENST00000621177 724 ntBASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MBD3L1Q8WWY6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 FAM45BP-202ENST00000592932 1624 ntBASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.46□□□□□ -0.26
MBD3L1Q8WWY6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L1Q8WWY6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms